GATE is a model-based, open source tool for chromatin states prediction based on time-course Epigenetic marks data.

After launching R and changing its workspace path to the package path, open "Example.R" and execute. It will take up to 1 or 2 hours to complete depending on your machine specification and the output files will be in the same directory.

 

Last updated on 07/01/2013 by Pengfei Yu